WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      237       95.56      -   277     1.17     13.92

   Group 1       62       93.94      -    68     1.10      6.45
   Group 2       52       92.86      -    58     1.12     11.54
   Group 3       59       96.72      -    76     1.29     25.42
   Group 4       64       98.46      -    75     1.17     12.50

   Partial      240       96.77      -   294     1.23     17.92

   Group 1       62       93.94      -    72     1.16     12.90
   Group 2       55       98.21      -    64     1.16     16.36
   Group 3       59       96.72      -    80     1.36     27.12
   Group 4       64       98.46      -    78     1.22     15.62

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0376
KOG0469
KOG0894
KOG1137
KOG1185
KOG1468
KOG2653
KOG2906
KOG3048
KOG3297
KOG3313

# Category: Partial 
KOG0376
KOG0469
KOG0894
KOG1185
KOG2653
KOG3048
KOG3297
KOG3313